I found 2 places that look inviting and inexpensive.
1. Generator. Storkower Str.160,Berlin, Germany 10407
A hotel which sells itself as Hostel, mainly to young travelers as the equipment in the rooms is very basic, but nevertheless very clean and well located. A high-rise modern building set back from the road. In the Eastern part of Berlin with excellent connection to public transport. About $41/night.
2. Apart Hotel. SCHWALBENWEG 18,Berlin-Schoenefeld, Germany 0
Ideal for travelers who prefer an outside-city-centre location but don't want to miss the comfort of a first class hotel. A modern high rise building with a facade decorated with blue pattern. The hotel is located close to the Airport Schoenefeld and within easy walking distance to a S-Bahn station (tube) which takes you straight into the centre of Berlin. About $69/night.